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Yes.I also get different numbers of subdirectories when I list "/" than what the "link" count says and a third number if I list using "cygpath -w":
$ ls -ldF / drwxr-x--- 31 law 0 Dec 31 1969 // ## 31 links
$ cmd /c dir |grep DIR|wc -l 24 ## 24
dirs seen by windows
24
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